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    PCR mixture and condition (2X SUPERGREEN PCR MASTER MIX)

    Yin-Tse Huang

    Published: 2022-04-24 DOI: 10.17504/protocols.io.81wgb644qlpk/v2
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    Abstract

    PCR mixture and condition (2X SUPERGREEN PCR MASTER MIX)

    Steps

    For generic primers

    1.

    PCR mixture PCR condition for generic primers

    ABC
    ComponentVolumeFinal conc.
    Template (< 1 µg)X µL-
    Forward Primer (10 µM)1 µL0.4 µM
    Reverse Primer (10 µM)1 µL0.4 µM
    2x Master Mix12.5 µL-
    ddH20up to 25 µL-
    Total volume25 µL-
    2.

    PCR condition for generic primers

    ABCD
    StepTempSecCycle
    Initial denaturation95 ºC180
    Denaturation95 ºC3035 cycles
    Annealing53-58 ºC30
    Extension72 ºC60
    Final extension72 ºC210
    Preservation4 ºC∞

    For barcoded primers

    3.

    PCR mixture for barcoded primers

    ABC
    ComponentVolumeFinal conc.
    Template (< 1 µg)X µL-
    Forward Primer (10 µM)5 µL2 µM
    Reverse Primer (10 µM)5 µL2 µM
    2x Master Mix12.5 µL-
    ddH20up to 25 µL-
    Total volume25 µL-
    4.

    PCR condition for barcoded primers

    ABCD
    StepTempSecCycle
    Initial denaturation95 ºC180
    Denaturation98 ºC2035 cycles
    Annealing64 ºC
    Extension72 ºC
    Final extension72 ºC210
    PreservationPreservation4 ºC∞

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